Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159477g00001 ATGCAGGTGGGCGAAAGAGGGGTTCAATTATCAGGCGGACAAAAACAGAGGATAGCAATTGCTCGAGCAATAATCAAGAAACCAAGAATCCTTCTTTTGGATGAAGCAACAAGCGCCTTAGACACTAAATCAGAACGACTCGTTCAACAAGCACTCGACAATGCAACAATCGGCTGCACCACCATCGTAATTGCCCACCGCCTCTCCACAATCCAAAATGCTAACATAATCGCCGTCGTGCACGGCGGCAAAATCACCGAGATTGGCTCACACAACGAACTTCTCCAAAACGACACCGGCGTCTACTCCTCTCTTGTCCGC 321 0.4891 MQVGERGVQLSGGQKQRIAIARAIIKKPRILLLDEATSALDTKSERLVQQALDNATIGCTTIVIAHRLSTIQNANIIAVVHGGKITEIGSHNELLQNDTGVYSSLVR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159477g00001 107 Gene3D - 2 107 IPR027417 -
Trme159477g00001 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 106 IPR027417 -
Trme159477g00001 107 Pfam ABC transporter 4 38 IPR003439 GO:0005524
Trme159477g00001 107 PANTHER ABC TRANSPORTER B FAMILY 2 106 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159477g00001 Trme-Chr159477 1 321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159477g00001 2 107 Calmodulin-binding Proteins AT2G36910 64.486 2.32e-42 145