Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15943g00001 ATGCAATTTCAATTGATGGAGGGGTTTGCTTATATTGATATTCATTTTAAGACTAATGGGATTGTTTCTGGTTGCAATTATTCATACCTCAATGACAGAAACAGTATACCAATAGAACCTGAACCTGGCAGATGCCGAAGAACAGACGGTAAGAAGTGGCGGTGCAAGAGTGCGGTTCTTCCCGGTCAGAAATATTGTGCAACACATATGCATAGAGGTGCGAAAAGGCGTTGTATAAACCATGAACCTCCTCCTCCTCCTGCCGCCGCCGCCGTTGCTACTACTACAACTACTACTATTGGTTCTTCTGTTACCATTGCTTTGTTGCCTTATCCTTCAGCCGAAACCTCAACAGACATTCAGAAAGCGTATTGTCAAATTCCAAACACAAGGCTTTCAATGTCGGTTCCAGACAGTGCACCCTTTGTCGAATGCAACGAGAAAAGTGGTGGCAGCAGTGACACTGAAACTAGTACCACCGTCACCGACACCATCAATGACTATCTTTCTTTCTAA 516 0.4399 MQFQLMEGFAYIDIHFKTNGIVSGCNYSYLNDRNSIPIEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKRRCINHEPPPPPAAAAVATTTTTTIGSSVTIALLPYPSAETSTDIQKAYCQIPNTRLSMSVPDSAPFVECNEKSGGSSDTETSTTVTDTINDYLSF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15943g00001 171 ProSiteProfiles WRC domain profile. 39 88 IPR014977 -
Trme15943g00001 171 PANTHER GROWTH-REGULATING FACTOR 5 33 112 IPR031137 GO:0005634|GO:0006351|GO:0032502
Trme15943g00001 171 Pfam WRC 40 77 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15943g00001 Trme-Chr15943 752 1428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15943g00001 20 77 GRF Transcription Factor Family AT2G45480 50.000 9.52e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15943g00001 - - mtr:11412908 181.03