Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159370g00001 ATGCCAAACAGAAGTGTGGAACACCATTTATCTCACCGAGCAACGACTCCTCTCCCATGGAGTAGGAGAATAAAAATAGCACAAGACGCTGCTCGTGGATTAACATACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAACATCCTTCTGGATGATCAGTGGAATGCAAAGCTATCAGACTTTGGGTTAGCAAGACTCGGACCATCAGATGGACTAACCCATGTCTCAACAGCG 255 0.4353 MPNRSVEHHLSHRATTPLPWSRRIKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTA 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159370g00001 85 FunFam Os07g0541700 protein 1 84 - -
Trme159370g00001 85 SUPERFAMILY Protein kinase-like (PK-like) 1 81 IPR011009 -
Trme159370g00001 85 Gene3D Transferase(Phosphotransferase) domain 1 1 85 - -
Trme159370g00001 85 Pfam Protein kinase domain 3 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme159370g00001 85 PANTHER OS07G0668900 PROTEIN 1 84 - -
Trme159370g00001 85 ProSiteProfiles Protein kinase domain profile. 1 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159370g00001 Trme-Chr159370 15 430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159370g00001 1 84 Trihelix Transcription Factor Family AT1G70460 52.381 7.09e-24 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme159370g00001 Pkinase 4.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159370g00001 - - gmx:100790026 168.703