Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159235g00001 AATTCTGAGGAACGAGTTGGATCTTCTGACTCTCTCAGTCAAGGCAACGATGACAAAATAGTGCCACTGCTAGGATCTTCGTCGACAGGAGCACTTGGAAGCTCGAACGATCAGGATGATTCATCTGAGGTAGCTATGCTTCTTGCGTTAGGTGAGGGAGCGATAAAGCAGAAGAAGAGAAAACCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCTATANTTAAGGCTGATTTCTGGCTACTGTTTATTGTTTATTTTGTTGGTGTCGGCACTGGAGTTACTGTTCTGAATAATCTAGCCCAAATAGGTATCGCTCAAGGTGAAGAAGATACTACAACCTTACTGTCAATTTTCAGTTTTTGCAATTTTGTTGGCCGGCTTGGTGGAGGAGTTGTTTCCGAGCATTTTGTCAG 416 0.4279 NSEERVGSSDSLSQGNDDKIVPLLGSSSTGALGSSNDQDDSSEVAMLLALGEGAIKQKKRKPKRGEDFKFTEAIXKADFWLLFIVYFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159235g00001 138 MobiDBLite consensus disorder prediction 1 39 - -
Trme159235g00001 138 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 35 138 - -
Trme159235g00001 138 SUPERFAMILY MFS general substrate transporter 57 137 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159235g00001 Trme-Chr159235 107 522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159235g00001 6 138 Nodulin-like Gene Family AT1G80530 58.209 1.19e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159235g00001 - - lja:Lj0g3v0288039.1 219.55