Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159232g00001 GATTTGGAATTTCGTGTTAAAGACGATGACGTTTTTGGTGCTCAAACTATGGGGACAGTTAAGATTCCGGCGCAGAGAATTGCCACCGGCGAGTTAATTTCCGATTGGTTTCCGATTATCGGAGCTAATGGAAAACCGCCGAAGCCGGACACTGCACTTAATTTAGAAATGAAGTTCACGCCGGTGGACCAGAATCCGCTATACCTTCGTGGCATTGCGGCTGATCCGGAACACAAAGGCGTGAGACATACTTATTTTCCGGTGAGGAAGGGAAGCTCTGTGAGGCTTTACCAGGATGCACATTGTCCAGAAGGAACGGTACCGGAGATTAAGCTTGATGGTGGAAAGTGGGTTGGTCAATCTACCATAAGATTAAGCTTGTTAGGGAACCTTCTAGACCGTTGCCGCGGGGTGGCGATTTAA 423 0.4823 DLEFRVKDDDVFGAQTMGTVKIPAQRIATGELISDWFPIIGANGKPPKPDTALNLEMKFTPVDQNPLYLRGIAADPEHKGVRHTYFPVRKGSSVRLYQDAHCPEGTVPEIKLDGGKWVGQSTIRLSLLGNLLDRCRGVAI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159232g00001 140 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 66 IPR035892 -
Trme159232g00001 140 PANTHER PHOSPHOLIPASE D 2 105 IPR015679 -
Trme159232g00001 140 Pfam C2 domain 2 39 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159232g00001 Trme-Chr159232 1 496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159232g00001 2 116 Phospholipase D Gene Family (Wang group) AT4G35790 67.826 2.66e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159232g00001 K01115 - gmx:100801787 193.741