Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15920g00001 ATGGATGACACAGGGAATCCTGAAGGTTTAGGCGCTGAGTTATTTGAAACTCTAGTGAAGATGGCTCCTACAAAGGAGGAGGAGATCAAACTAAAAAATTATGATGGCGACCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAGCAAGTGCTCGATATCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGTTGTACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTAAGAAATCCTTTCAATCCCTTGAGGTGACAGGAAACAGAATGAATGTTGGAACCAATCGCGGCGGTGCTAAATCTTTCAAACTGGACACACTCTTGAAACTTGCAGATATAAAAGGAACAGATGGAAAGACAACATTGCTCCATTTTGTTGTGCAAGAGATTATTAGATCTGAAGGTACAGGTGCTGAATCCACAAATGAGAATGTTCAAAACCAAACAAATCCCCAGTTCAATGAGGATGAGTTCAGAAAGAAAGGATTACAGGTTGTGGCTGGATTGAGTAGAGACTTTGGCAATGTAAAAAAGGCGGCAGGAATGGACTCGGATGTCTTAAGCAGCTATGTCATAAAACTTGAAATGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATGTAAAACCAGATATGCAAGGAAACTTCTTTAACTCAACAGAGATATTTTTGAAAGATGCTGAAGAGAAAATATTAAAGATCAAGGCTGATGAGATAAGGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATACAACAAAGGAAGAAGCTCACCCTTTTAGAATTTTTATGATT 810 0.3827 MDDTGNPEGLGAELFETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKQVLDIPLAFKRVEAMLYRANFETEVNYLKKSFQSLEVTGNRMNVGTNRGGAKSFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGTGAESTNENVQNQTNPQFNEDEFRKKGLQVVAGLSRDFGNVKKAAGMDSDVLSSYVIKLEMGLDKVRLVLQYVKPDMQGNFFNSTEIFLKDAEEKILKIKADEIRALFLVKEVTEYFHGDTTKEEAHPFRIFMI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15920g00001 270 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 270 IPR015425 -
Trme15920g00001 270 Gene3D Formin, FH2 domain 87 270 IPR042201 -
Trme15920g00001 270 Gene3D Formin, FH2 domain 3 86 IPR042201 -
Trme15920g00001 270 SMART it6_source 1 270 IPR015425 -
Trme15920g00001 270 Pfam Formin Homology 2 Domain 87 270 IPR015425 -
Trme15920g00001 270 Pfam Formin Homology 2 Domain 5 85 IPR015425 -
Trme15920g00001 270 PANTHER FORMIN-RELATED 8 270 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme15920g00001 270 SUPERFAMILY Formin homology 2 domain (FH2 domain) 5 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15920g00001 Trme-Chr15920 68 1059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15920g00001 5 270 FH2 protein (formin) Gene Family AT5G67470 66.084 2.13e-119 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15920g00001 - - gmx:100803578 449.899