Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159176g00001 GATGCCCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTGAACAACCAAAGAAGCAGCTTTGTGATCTGCTTTTCAAAGATGAAACAAATAGAGCTGTGATTTCAATCCATGGTATGGGAGGTTTAGGGAAGACAACATTGGCAAAACAAGTCTATGAAGATCCAAAAGTAAAGAAATATTTCAGGATTCATGCTTGGGTTAATCTCTCACAATCTTTCAACATGGAAGAGATACTGAAAGACCTTGCACAACAACTCCATAATGTTATTGGAAAACCAGCTCCAGAATCAATTGGAATGATGAAAATTGACAATTTGAAAGAGTTTATCAAGAATTTTCTTCAGAGAAGTAAAAAGTATCTAATTGTGCTTGATGATGTGTGGCATGTGAATGTATGGGATGCTGTGAAGCTTGCTTTGCCTAATAACAACTGCGGCAGTAGAGTGATTCTTACGACGCGCAAGAAAGAT 471 0.3737 DALLLEEADLVGIEQPKKQLCDLLFKDETNRAVISIHGMGGLGKTTLAKQVYEDPKVKKYFRIHAWVNLSQSFNMEEILKDLAQQLHNVIGKPAPESIGMMKIDNLKEFIKNFLQRSKKYLIVLDDVWHVNVWDAVKLALPNNNCGSRVILTTRKKD 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159176g00001 157 Pfam NB-ARC domain 14 157 IPR002182 GO:0043531
Trme159176g00001 157 FunFam Probable disease resistance protein At1g61300 4 157 - -
Trme159176g00001 157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 156 IPR027417 -
Trme159176g00001 157 Gene3D - 3 157 IPR027417 -
Trme159176g00001 157 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 7 156 IPR039203 GO:0050832
Trme159176g00001 157 PRINTS Disease resistance protein signature 33 48 - -
Trme159176g00001 157 PRINTS Disease resistance protein signature 114 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159176g00001 Trme-Chr159176 54 524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159176g00001 6 156 WRKY Transcription Factor Family AT4G12020 23.602 5.52e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159176g00001 K13457 - gmx:100305458 251.906