Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159141g00001 CATGAGAGGCTTATCAAGTTAGTTAAGATTGGTGGAATTGTTGCCTACGATAACACACTTTGGGGAGGAACTGTTGCTTTGCCAGAAATGGCAGTTTCAGAACAAAAGAGAGATTGGAGAAGATGTGCACTTGATTTCAACAAAGCAATTTCAAAGGATTCTCGTCTGGAAATTGCTTTGGTTTCAATAGGTGACGGACTAACTATCTGCAGGCGTGTTTGCTGA 225 0.4133 HERLIKLVKIGGIVAYDNTLWGGTVALPEMAVSEQKRDWRRCALDFNKAISKDSRLEIALVSIGDGLTICRRVC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159141g00001 74 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 73 IPR002935 GO:0008171
Trme159141g00001 74 PANTHER O-METHYLTRANSFERASE-RELATED 1 73 - -
Trme159141g00001 74 Gene3D Vaccinia Virus protein VP39 1 74 IPR029063 -
Trme159141g00001 74 Pfam O-methyltransferase 1 73 IPR002935 GO:0008171
Trme159141g00001 74 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 72 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159141g00001 Trme-Chr159141 1 225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159141g00001 1 74 Monolignol Biosynthesis Gene Families AT1G67980 54.054 1.46e-26 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159141g00001 K00588 - gmx:100795229 121.324