Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159139g00001 AGGCTTTCAGAAACGTCCGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTGATTTTCATAGCGAAACTACAACATAGAAACCTTGTGAAACTCTTGGGTTGTTGCTTCGAAGAAAACGAAAAGATACTAGTGTACGAGTACATGCCAAATTCAGGCCTCGACTTTCACCTATTCAATTTGGAAAATCATAATCAACTAGATTGGAATACACGACTAAACATTATAAACGGAATCGCAAGAGGACTGTTATACCTTCATGAGGATTCTCGACTTAGAGTAATCCATAGAGATATGAAAGCCAGCAATGTTCTTTTGGACGATGAAATGAATCCAAAGATATCAGATTTCGGATTAGCAAGAAGGTTCGAAAAAGGCCAAAGTCAGACAGAAACAAAAAGAGTTATGGGAACCTAG 414 0.3816 RLSETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCFEENEKILVYEYMPNSGLDFHLFNLENHNQLDWNTRLNIINGIARGLLYLHEDSRLRVIHRDMKASNVLLDDEMNPKISDFGLARRFEKGQSQTETKRVMGT 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159139g00001 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme159139g00001 137 SUPERFAMILY Protein kinase-like (PK-like) 8 137 IPR011009 -
Trme159139g00001 137 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Trme159139g00001 137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Trme159139g00001 137 SMART tyrkin_6 1 136 IPR020635 GO:0004713|GO:0006468
Trme159139g00001 137 Pfam Protein tyrosine and serine/threonine kinase 7 131 IPR001245 GO:0004672|GO:0006468
Trme159139g00001 137 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 137 - -
Trme159139g00001 137 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 48 137 - -
Trme159139g00001 137 Gene3D Transferase(Phosphotransferase) domain 1 48 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159139g00001 Trme-Chr159139 2 506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159139g00001 1 137 Receptor kinase-like Gene Family AT4G23130 64.964 4.25e-62 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme159139g00001 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159139g00001 - - tpra:123894542 274.248