Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15910g00001 ATGTCTATGAAAATAGCTCATCAAAACCAAAATGCTCAATCATCAAAACCTCTTCACAAAAAGACATACTCATGCAACTTCTGCATGGGAAAGTTTTACAGTTCACAAGCCTTAGGGGGACACCAAAATGCACACAAAAGGGAAAGAGAAGCAGCTAGAAAATTCCAATTATCTCATAGTTCTTTGGTGGCGAGGTCATTAGGAATCAAACCTCACTCTCTTGTGCACAAACAAAGCAGAGAAAGAGCTGCTACTATGGTGGCTCAATTCAATGTTAATGATGCAAGTTCTAGAATTGGAATGGCATGGACTACACCCCTTGTTCTTGAACATGGTGTTGATTTTGTATGGCATGGAAGCTTTCGAATGGACTTGCCAAAGCAAGAATCAGATATACATCATAAGTTGGACTTAAATCTTAGGCTTTGA 429 0.3916 MSMKIAHQNQNAQSSKPLHKKTYSCNFCMGKFYSSQALGGHQNAHKREREAARKFQLSHSSLVARSLGIKPHSLVHKQSRERAATMVAQFNVNDASSRIGMAWTTPLVLEHGVDFVWHGSFRMDLPKQESDIHHKLDLNLRL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15910g00001 142 PANTHER ZINC FINGER PROTEIN 4-LIKE 7 142 - -
Trme15910g00001 142 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Trme15910g00001 142 Gene3D Classic Zinc Finger 1 95 - -
Trme15910g00001 142 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Trme15910g00001 142 SUPERFAMILY beta-beta-alpha zinc fingers 19 50 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15910g00001 Trme-Chr15910 576 1004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15910g00001 9 139 C2H2 Transcription Factor Family AT1G24625 34.667 7.06e-18 74.7