Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159036g00001 ATGATTGTAGCATTTAGAATTATATCTTGTAGATTTGGTGGTGCTCTAAAGCCTACTGATATTGATCCATTATGGGTTCATGTCACTTGTGCCTGGTTTCGACCTGAAGTATCTTTTGCTAGTGATGAGAAAATGGAGCCTGCTTTGGGTATCTTGAGTATTCCATCAAATTCTTTTGTGAAG 183 0.377 MIVAFRIISCRFGGALKPTDIDPLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVK 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159036g00001 61 Pfam PHD-zinc-finger like domain 12 56 - -
Trme159036g00001 61 ProSiteProfiles Extended PHD (ePHD) domain profile. 1 61 IPR034732 -
Trme159036g00001 61 PANTHER PHD FINGER PROTEINS 13 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159036g00001 Trme-Chr159036 36 294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159036g00001 6 46 C2H2 Transcription Factor Family AT3G14740 48.889 5.12e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159036g00001 - - gmx:100808761 102.834