Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15891g00001 AATAGCGACGGTCAGAGTGTCGCTATTGACTGGCTATGGCGACGTTGGGAGTGTCGCTACTCTCTCTCCCTACTGCAGCGTCAGTTTGTGTCTCCTGAGAGGGATATTACGATAAATAAGTTTGAGAAGGGGGATTTGAGCCAATGGAAGTTGGGTTGGAATTTTAGACTTCTAACTGCTGCATACACGGGAATTGTGGGTACTGGAATAAATTTTATTCTGGTTACATGGTGTGTAGGGATGAGAGGTCCGCTGTTCGCCTCTGTTTTCAATCCTTTGTTGCTTGTGATTGTGGCAATTGTCGGTTCACTTATGCTAGATGAGAAGTTATACTTAGGAAGGTATATATACACATTCATAACGAATTAG 369 0.4336 NSDGQSVAIDWLWRRWECRYSLSLLQRQFVSPERDITINKFEKGDLSQWKLGWNFRLLTAAYTGIVGTGINFILVTWCVGMRGPLFASVFNPLLLVIVAIVGSLMLDEKLYLGRYIYTFITN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15891g00001 122 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 116 - -
Trme15891g00001 122 PANTHER WAT1-RELATED PROTEIN 18 113 IPR030184 GO:0016020|GO:0022857
Trme15891g00001 122 Pfam EamA-like transporter family 55 120 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15891g00001 Trme-Chr15891 2 561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15891g00001 43 120 Nodulin-like Gene Family AT1G68170 55.128 1.10e-22 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15891g00001 - - cill:122315043 113.62