Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme158882g00001 GATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTTATTAATGAATTTGGAGGTCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAATGGCACCTTTACGAATATGAGATTAGCAAGTGTGATGCATGTGCCTTATACCGTTTAGAACTAAAGCTTGTTGATGGGAAGAAGAACTCAAAGGCAAAATTAACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGTAAAGCTCTCTGCCGAGTTTCCACCTGATAACAGAAGGCCTGCCAAAGGCAGAGCCAAGATTAATGCCAAAGTTGGCATGGGTGCTGTCTATTCAGCTTCAAACAGAGTGACCCCACTAAATGGAACATACGAATATGGTTTAGCTGCACCATATGACTATCTTGTCGAGAACATGGGCGACTATTATGGGACATGA 498 0.4237 DKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKLTNDSVADLQKQMVKLSAEFPPDNRRPAKGRAKINAKVGMGAVYSASNRVTPLNGTYEYGLAAPYDYLVENMGDYYGT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme158882g00001 165 Coils Coil 86 106 - -
Trme158882g00001 165 PANTHER TRANSCRIPTION FACTOR VOZ1 1 160 IPR039277 GO:0006355|GO:0048578
Trme158882g00001 165 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme158882g00001 Trme-Chr158882 1 498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme158882g00001 1 163 VOZ-9 Transcription Factor Family AT1G28520 68.605 5.27e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Trme158882g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme158882g00001 - - gmx:100798565 319.701