Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15872g00001 ACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACCGGTCAACTTACTCTCAAATCAGATGTTTATAGCTTTGGTGTAGTTCTTCTCGAAATAATTACAGGAAGGAAAGCTATTGACAATTCGAAATCTGCGGCAGAGCAGAATCTTGTTGCATGGGCTAGACCGTTGTTCAAAGATCGAAGGAAATTTTCGCAAATGGCTGATCCTATGCTTCAAGGTCAGTATCCTTCGAGAGGGCTATACCAGGCCCTTGCTGTTGCAGCAATGTGTGTTCAAGAACAAGCTAATATGCGTCCGGTTATAGCTGATGTTGTCACAGCTTTGTCTTACCTTGCTTCGCAAAGACATGATCACAATACTCAGACAGTCCAAAACTCTCGCCTCTCTCCTGGTACTCCCTCTAGAGCCCGGAGGGGGCGATAA 438 0.4543 TRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAAEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRHDHNTQTVQNSRLSPGTPSRARRGR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15872g00001 145 PANTHER OS07G0668900 PROTEIN 1 126 - -
Trme15872g00001 145 MobiDBLite consensus disorder prediction 121 145 - -
Trme15872g00001 145 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Trme15872g00001 145 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme15872g00001 145 SUPERFAMILY Protein kinase-like (PK-like) 1 111 IPR011009 -
Trme15872g00001 145 Pfam Protein tyrosine and serine/threonine kinase 8 112 IPR001245 GO:0004672|GO:0006468
Trme15872g00001 145 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15872g00001 Trme-Chr15872 1 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15872g00001 1 118 Glycoside Hydrolase AT3G07070 63.559 2.44e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trme15872g00001 PK_Tyr_Ser-Thr 4.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15872g00001 - - gmx:100499648 268.47