Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme158438g00001 ATGCGCGACTTACGGTTTGTGAAAACATTAACTTATTATGACATCACTACTGGGTTTTTGATCATTCCGTATGAAGAATTTGGAGAGAAGGTTCTTGAAAAGAAAGATACTACAATTAGTGTAGTTGATGACTGTGGAAACAAGTGGGATTGTATGCTGATATATGTTTCTTTTCCAAATAAGCATTTCAAGATTGGTGGTGAGTGGAAACGAATGGTGGCTGCGCGGAGAATTGCTGTTGGCGATGTTATTGAACTTTTTGGACGAACAGATACAAAGAGTGAATCTCTCTACTTAATTTTGCATCACTGA 312 0.375 MRDLRFVKTLTYYDITTGFLIIPYEEFGEKVLEKKDTTISVVDDCGNKWDCMLIYVSFPNKHFKIGGEWKRMVAARRIAVGDVIELFGRTDTKSESLYLILHH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme158438g00001 103 Gene3D - 2 98 IPR015300 -
Trme158438g00001 103 ProSiteProfiles B3 DNA-binding domain profile. 5 103 IPR003340 GO:0003677
Trme158438g00001 103 Pfam B3 DNA binding domain 6 87 IPR003340 GO:0003677
Trme158438g00001 103 SUPERFAMILY DNA-binding pseudobarrel domain 5 87 IPR015300 -
Trme158438g00001 103 CDD B3_DNA 5 90 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme158438g00001 Trme-Chr158438 33 444 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Trme158438g00001 B3 4.1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme158438g00001 - K00963 tpra:123908244 121.709