Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme158397g00001 ATGGGTGAGGAAACACAAACTATGTTAGAAAACTCATTTATAGGAAGCACTGAAATAAAACACAAACTTGCTCACAAAAGGGTTCTTCTAGTTCTAGATGACGTTGATTCAACAAAGCAATTAGAAGCGCTTGCCGGAGGATGTGATTGGTTTGGTTCCGGTAGCAGGATCATTATAACAACAAGGGACAAATCATTGGTAGATAAGCATGTGATGGATAGTTTTATCCTTGAAAAATATAAAATGGAAGAGCTGAATGATCACGACTCTATGGAACTCTTTTGTTGGCATGCCTTCAAGACGAGTAATCCTGCAAAACACTTTGAAGGTCTTTCTATTCTTGCCGTGAGTTATGCAAAGGGTGTTCCATTGGTTTTGAAAATATTGGGCTCCAATGTGAAGAGTTGGGAGCAAGATGATTGGGCAGTGATATTGGAGCGTAGTATCAGAAATACAAATGCGCGGAATTCTTATGAAACTAAG 483 0.3892 MGEETQTMLENSFIGSTEIKHKLAHKRVLLVLDDVDSTKQLEALAGGCDWFGSGSRIIITTRDKSLVDKHVMDSFILEKYKMEELNDHDSMELFCWHAFKTSNPAKHFEGLSILAVSYAKGVPLVLKILGSNVKSWEQDDWAVILERSIRNTNARNSYETK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme158397g00001 161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 150 IPR027417 -
Trme158397g00001 161 Gene3D - 84 160 IPR042197 -
Trme158397g00001 161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 147 IPR044974 GO:0006952
Trme158397g00001 161 Pfam NB-ARC domain 16 145 IPR002182 GO:0043531
Trme158397g00001 161 Gene3D - 3 75 IPR027417 -
Trme158397g00001 161 PRINTS Disease resistance protein signature 119 133 - -
Trme158397g00001 161 PRINTS Disease resistance protein signature 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme158397g00001 Trme-Chr158397 8 490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme158397g00001 19 130 WRKY Transcription Factor Family AT5G45050 35.714 4.01e-16 72.8