Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15838g00001 ATGCATTGGGAAGGGAAACATCAGGTTAAGGTATTGCCTCTAATGAAGACTCTCACATTCAACATAATTTGTTCACTCCTGTTTGGTCTTGAGACTGGAGAACAAAGAGATCAATTCATGAACCCCTTCCAAGCAATGATGAAAGGAATGTTGTCTGTCCCAATTAATGCACCCTTCACACGCTACAACCGGAGCCTCAAGGCAACTGCAAGGATCCAAAACATGTTGAAGGAGATTGTGCACCAGAAGAAAGTTGAACAGGAGAAAAATGGCGTCAATCCTCGCCAAGACTTAATCAGTTGCTTGCTTAACATGGTTGAAGATGACAAACAAGTTTTAACTGAGAAGGAAATCATCCATAATGCTGTGCTTGTCATGGTTGCAGGACATGACACATCGTCTGTTCTAATCACTTTCATTATCCGGCTATTGGCTAATGAACCAGCTATTCGTGCAGCTGTTCTTCAAGAACAGGAAGAGATAGCAAAAGGCAAGCTTTTAGGAGAGCCTCTAACATGGGAAGATCTTTCAAAGATGAAGTACACTTGGAGAGTAGCAATGGAAACTCTGAGAATGTTTCCTCCCATCTTTGGTGGCTTCAGAAAAGCGGTAACCGATATTGAATATGGTGGATACATTATACCCAAAGGGTGGCAG 657 0.4231 MHWEGKHQVKVLPLMKTLTFNIICSLLFGLETGEQRDQFMNPFQAMMKGMLSVPINAPFTRYNRSLKATARIQNMLKEIVHQKKVEQEKNGVNPRQDLISCLLNMVEDDKQVLTEKEIIHNAVLVMVAGHDTSSVLITFIIRLLANEPAIRAAVLQEQEEIAKGKLLGEPLTWEDLSKMKYTWRVAMETLRMFPPIFGGFRKAVTDIEYGGYIIPKGWQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15838g00001 219 Pfam Cytochrome P450 8 217 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme15838g00001 219 SUPERFAMILY Cytochrome P450 5 218 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme15838g00001 219 Gene3D Cytochrome P450 1 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme15838g00001 219 PANTHER CYTOCHROME P450 26 2 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15838g00001 Trme-Chr15838 410 1401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15838g00001 3 219 Cytochrome P450 AT2G42850 39.908 7.41e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15838g00001 - - vvo:131633618 364.385