Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme158189g00001 TCCCATATTGATTTTCTGGATTCTTCTGATGAAAATAATGCTGACTGGCGGCGCCCTAGAGCAATTGCAATGGACTGTGAAATGGTTGGTGGTGGAAGTGATGGATCACTGGAACTTTGTGAGCATCTTCGAGATGGTATGCCACTTAAGGCAGTTCGGGAAAAAGTATTACAAATTCTATACAATGGAGAATCCATTGGTAAAGCTAGACTGGATGGTGGCAAGGCCAGGCTTCTTGTAGGGCATGATTTGGCCCATGATTTTGATTGCTTGGGAATGGATTATCCCTATCACATGATCAGGTAG 306 0.4379 SHIDFLDSSDENNADWRRPRAIAMDCEMVGGGSDGSLELCEHLRDGMPLKAVREKVLQILYNGESIGKARLDGGKARLLVGHDLAHDFDCLGMDYPYHMIR 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme158189g00001 101 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 41 97 IPR047021 GO:0004527
Trme158189g00001 101 Gene3D - 40 101 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme158189g00001 Trme-Chr158189 2 519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme158189g00001 17 101 C2H2 Transcription Factor Family AT3G27970 42.975 2.72e-24 92.4