Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15810g00001 ATGGATCTTAGTGACCTCATATCTGCTTTTTCAAATAAGGGATTTACCGCCAAAGAGATGGTTGTCCTTTCAGGAGCTCATACAACAGGACAAGCCAGGTGTCAGTTGTTTAGAGGGCGGATTTATAATGAAACAATCATTGATTCAAATTTTGCAACCTCAGTGAAATCAAACTGTCCAAGCACTGGTGGTGATAGCAACTTAACCTCACTTGATGTCACAACCAATGTGTTATTTGACAATGCTTATTTCAAGAATCTAGTTAACAAAAAAGGACTTCTACATTCTGATCAACAACTCTTCAGTGGTGGTTCCACTGACTCTCAAGTCACTACTTATAGCACTAGCCCTTCAACTTTCTCTGCAGATTTTGCTAGTGCTATGGTGAAAATGGGAAACCTTAGCCCTTTAACTGGGAACAATGGCCAGATTCGTACTAATTGCCGCAAAATTAACTAA 459 0.3943 MDLSDLISAFSNKGFTAKEMVVLSGAHTTGQARCQLFRGRIYNETIIDSNFATSVKSNCPSTGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPSTFSADFASAMVKMGNLSPLTGNNGQIRTNCRKIN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15810g00001 152 ProSiteProfiles Plant heme peroxidase family profile. 1 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 FunFam Peroxidase 1 131 - -
Trme15810g00001 152 SUPERFAMILY Heme-dependent peroxidases 2 152 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 Pfam Peroxidase 2 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 PANTHER PEROXIDASE 72-RELATED 2 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 Gene3D Peroxidase, domain 2 2 131 - -
Trme15810g00001 152 PRINTS Plant peroxidase signature 86 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 PRINTS Plant peroxidase signature 70 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 PRINTS Plant peroxidase signature 18 30 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme15810g00001 152 Gene3D - 132 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15810g00001 Trme-Chr15810 510 1398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15810g00001 3 152 Peroxidase AT5G05340 59.211 1.54e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15810g00001 K00430 - gmx:100811634 278.485