Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme158060g00001 ATGTTATGTGATGGTTTTAAGAATGTTCCAAATTTGGTGCTGCGAGATGTTACCCCTTTGTCACTTGGTATCTTAAATAATGGAGATATCATGAGCGTGGTGATTCCTAGGAATACTTCTGTACCTGTCAAGAAGGCAGAAGGTTATGTTACAGCTTCAGACTACCAATCTTCAGTCCCAATTGATGTTTATGAGGGTGAGAGAGCAAGAGCCAGTGAGAACAATCTACTTGGTTCTTTCAATCTATATTGTCTTTCAGCTGCCCCTCGTGGCCATCCCATGTCTGTATGCTTCGCTCTCGATGAAAATGGTATCTTAACTGTTTCTGCAACGGAAACATCTACCGGCAATACGAACGAGATCACAATAACCAAGAACAAAGAAAGGTTATCCAGAGACGAAATTAAAAAATTGATTCAAGAAGCTAGAGAGTACCATGCTGAAGATGAGAGATTCCTAAGGAAGGCTAAG 471 0.4076 MLCDGFKNVPNLVLRDVTPLSLGILNNGDIMSVVIPRNTSVPVKKAEGYVTASDYQSSVPIDVYEGERARASENNLLGSFNLYCLSAAPRGHPMSVCFALDENGILTVSATETSTGNTNEITITKNKERLSRDEIKKLIQEAREYHAEDERFLRKAK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme158060g00001 157 PANTHER HEAT SHOCK PROTEIN 70KDA 11 149 IPR013126 GO:0005524|GO:0140662
Trme158060g00001 157 Pfam Hsp70 protein 5 152 IPR013126 GO:0005524|GO:0140662
Trme158060g00001 157 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 8 153 IPR029047 -
Trme158060g00001 157 PRINTS 70kDa heat shock protein signature 91 107 - -
Trme158060g00001 157 PRINTS 70kDa heat shock protein signature 11 30 - -
Trme158060g00001 157 FunFam Heat shock 70 kDa protein 6 157 - -
Trme158060g00001 157 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 5 157 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme158060g00001 Trme-Chr158060 25 495 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme158060g00001 4 155 Calmodulin-binding Proteins AT3G12580 54.248 1.94e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme158060g00001 K03283 - gmx:102667578 201.83