Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme157883g00001 GGAATTGGGATGAATCTTGAATCTGGATTTTTGCTTTATGGACCTCCAGGTTGTGGTAAAACACTGATTGCCAAGGCTGTTGCCAATGAGGCTGGAGCTAATTTCATTCATATTAAG 117 0.4103 GIGMNLESGFLLYGPPGCGKTLIAKAVANEAGANFIHIK 39
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme157883g00001 39 PANTHER AAA-FAMILY ATPASE 2 39 - -
Trme157883g00001 39 Gene3D - 1 39 IPR027417 -
Trme157883g00001 39 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 38 IPR027417 -
Trme157883g00001 39 Pfam ATPase family associated with various cellular activities (AAA) 11 39 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme157883g00001 Trme-Chr157883 59 175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme157883g00001 2 39 Calmodulin-binding Proteins AT3G56690 57.895 7.21e-11 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme157883g00001 K14571 - atr:18441860 79.3369