Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15779g00001 AGGATTGCTGTATACAAGGCACTCTATAGACTCTTCGGAGGGTTTGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTATATGATGGAGTGGATATACTCAGTCTTTCAGTTGGACCCAACAGTCCTCCAGCAGCCGGCAAAACTACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGGAATGGCGGTCCTTTCCCTAAGACAATGGTTTCATATAGTCCGTGGATAGCATCTGTAGCCGCTGCAATTGATGATCGTAGATACAAAAACCATTTGATGCTTGGAAATGGAAAAATCTTAGCTGGACTCGGGTTATCACCTTCTACACATTTAAACCGAACATACACATTGGTTGCTGCAAATGATGTGCTGCTAGATTCTTCGGTTATGAAGTACAGCCCCACAGATTGCCAGAGACCAGAAGTTTTTAACAAGAAATTGATAGAGGGAAATATTCTTCTGTGTGGATATTCTTTCAACTTTGTTGTTGGCTCTTCCTCAATCAAGAAAGTATCAGAAACAGCAAAGGCCCTTGGTGCTGCTGGATTTGTTCTCTGTGTTGAAAATGTTTCCCCTGGAGCAAAATTTGATCCTGTCCCAGTTGGCCTTCCTGGGATTCTTATCTCAGATGTCAGCAATTCAAAGAAACTTATAGACTATTATAATATCTCTACACCAAGAGACTGGACTGGACGGGTGAAGAGTTTCAAAGGATTAGGTAAAATCGGTGAAGGTTTGATACCTATTCTACATAAGTCTGCGCCGCAGGTGGCATTATTCTCTGCTAGAGGGCCAAATATAAAGGACTTCAACTTCCAAGAGGCGGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGAGTCCAAATGGAACTGATGAGGCAAATTATGTTGGTGAGTAA 963 0.4247 RIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNSPPAAGKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLMLGNGKILAGLGLSPSTHLNRTYTLVAANDVLLDSSVMKYSPTDCQRPEVFNKKLIEGNILLCGYSFNFVVGSSSIKKVSETAKALGAAGFVLCVENVSPGAKFDPVPVGLPGILISDVSNSKKLIDYYNISTPRDWTGRVKSFKGLGKIGEGLIPILHKSAPQVALFSARGPNIKDFNFQEADLLKPDILAPGSLIWAAWSPNGTDEANYVGE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15779g00001 320 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 311 IPR045051 -
Trme15779g00001 320 Pfam Subtilase family 17 310 IPR000209 GO:0006508|GO:0008236
Trme15779g00001 320 Gene3D Peptidase S8/S53 domain 1 313 IPR036852 GO:0004252|GO:0006508
Trme15779g00001 320 CDD PA_subtilisin_like 108 244 - -
Trme15779g00001 320 Gene3D - 99 264 - -
Trme15779g00001 320 ProSiteProfiles Serine proteases, subtilase domain profile. 1 320 - -
Trme15779g00001 320 SUPERFAMILY Subtilisin-like 1 311 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15779g00001 Trme-Chr15779 1 1462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15779g00001 1 320 Subtilisin-like Serine Gene Family AT2G19170 85.000 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15779g00001 - - tpra:123910073 629.017