Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15777g00001 ATGCTTCGTGACAAATTAACTGGTAAGAGATATTTGTTAGTTCTAGATGACATTTGGAGTGAGAGTTTTGAAAAATGGGATAAGTTGAGGACTTATTTGATGTGTGGTGCTCAAGGCAGTAATGTTTTAGTGACAACTCGTAATAAAACCGTGGCACAGACAATGGGTGTAGGTGACCCCTATGTTTTGAATGGTTTGACTCAAGAAGAATCATGGGGTTTGTTAAAGAAGATTACATTTGGGGATGATACCATTGAAGTGAATCGATCTCTTGAATCAATTGGTAAGAAGATAGCTAAAAAGTGTAGTGGTATTCCACTAGCAATCAGAACACTAGGAGGCCTATTACAGGGTAAAAGGGAAGAAAAGGAATGTATTGATATTTTACAAGGTGCCTTTTGGAAATTATGTGAAGACGAAGAAAACATCATGCCAATGTTGAAACTGAGTTACCAAAATTTGTCTCCTCAACTACGACAATGTTTTGCTTACTGCTCTTTATATCCTAAGGATTGGGAAATAAAGAAGGATGAGTTGATTCAACTATGGATGGCACAGGGTTATCTTGAATGTTATGATGAAAAGCAGCGTATGGAAGATATATCGGTAACCAATTTGTGA 621 0.3688 MLRDKLTGKRYLLVLDDIWSESFEKWDKLRTYLMCGAQGSNVLVTTRNKTVAQTMGVGDPYVLNGLTQEESWGLLKKITFGDDTIEVNRSLESIGKKIAKKCSGIPLAIRTLGGLLQGKREEKECIDILQGAFWKLCEDEENIMPMLKLSYQNLSPQLRQCFAYCSLYPKDWEIKKDELIQLWMAQGYLECYDEKQRMEDISVTNL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15777g00001 206 Gene3D - 151 206 IPR036388 -
Trme15777g00001 206 Gene3D - 1 57 IPR027417 -
Trme15777g00001 206 PRINTS Disease resistance protein signature 5 19 - -
Trme15777g00001 206 PRINTS Disease resistance protein signature 102 116 - -
Trme15777g00001 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 165 IPR027417 -
Trme15777g00001 206 Gene3D - 65 150 IPR042197 -
Trme15777g00001 206 Pfam NB-ARC domain 1 153 IPR002182 GO:0043531
Trme15777g00001 206 PANTHER DISEASE RESISTANCE PROTEIN RP 2 192 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15777g00001 Trme-Chr15777 776 1396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15777g00001 1 162 WRKY Transcription Factor Family AT5G45050 32.335 5.50e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15777g00001 - - tpra:123883200 360.147