Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme157577g00001 GTGACTAGGATTGTTGCCATAGCACCTAGTCTTGTTGTCTCTATCATTGGTGGTTCTTCTGGAGCTGGAAGACTTATCATCATTGCATCGATGATACTTTCTTTTGAGCTTCCATTCGCTTTAATTCCACTCCTTAAGTTTAGCAGCAGCGCCACCAAGATGGGACCTCACAAGAATTCTATGATTATCATTGTCATCTCATGGATACTGGGTTTGGGAATCATCGGTATCAATGTGTACTACCTCATTACTGCTTTTGTGGGTTGGTTAATTCATAGTAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGATGATAGTGTTCCCTCTAATGGCACTCTATGT 344 0.4157 VTRIVAIAPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSATKMGPHKNSMIIIVISWILGLGIIGINVYYLITAFVGWLIHSSLPKVANVFIGMIVFPLMALYV 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme157577g00001 115 Pfam Natural resistance-associated macrophage protein 1 60 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme157577g00001 115 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 114 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme157577g00001 Trme-Chr157577 1 527 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme157577g00001 1 115 Inorganic Solute Cotransporters AT1G15960 60.000 4.21e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme157577g00001 K21398 - gmx:100787785 176.407