Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15746g00001 ATGGAGATGGTTATTTTACCAACTAAGAGAAGAGACTTGTTCACTGGTCTTCGAAGGCCAGCTAGAGGTTTGCTTCTTTTTGGTCCGCCTGGTAATGGTAAGACCATGCTTGCCAAAGCAGTTGCTTCAGAATCTGAAGCAACATTTTTTAATGTCACGGCAGCTTCCTTGACGTCAAAATGGGTTGGCGAAGCTGAAAAGCTTGTACGGACACTATTCATGGTAGCTACATCGAGACAGCCATCTGTAATTTTCATTGACGAGGTATCTCTGTCATCTATAGACTCTGACCCCGACCCCCTTATCCTGCTACCAAATATGACAACAAGACGGATTGTCATGAAAGAATATCTTTAG 357 0.4342 MEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSKWVGEAEKLVRTLFMVATSRQPSVIFIDEVSLSSIDSDPDPLILLPNMTTRRIVMKEYL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15746g00001 118 Gene3D - 2 89 IPR027417 -
Trme15746g00001 118 PANTHER AAA DOMAIN-CONTAINING 2 89 - -
Trme15746g00001 118 SMART AAA_5 20 118 IPR003593 GO:0016887
Trme15746g00001 118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 95 IPR027417 -
Trme15746g00001 118 Pfam ATPase family associated with various cellular activities (AAA) 24 89 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15746g00001 Trme-Chr15746 428 1142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15746g00001 1 94 Calmodulin-binding Proteins AT3G56690 52.083 7.18e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15746g00001 K13254 - zju:107423715 170.629