Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme1573g00001 | ATGAGCAATGTGTCTCTGGCAAGAACAGATAAGAGTGATAATGAGAAGATTACTTACATAGTACATGTTGCAAGATCTCAAATGCCAACAAGCTTTGATCACCATTTGACATGGTATGGATCAATTCTTAAGTCGGTATCTATGTCAGCTGAAATGTTATACACCTATAACAATGCACTTAATGGATTCTCGACAACTTTGACAGTTGAAGAACTTCAGTCATTAAAGAGCCAACCTGGGATTCTTAAGGTGACACCAGATAAAACGTATAAACTTCTCACAACTCGAACACCGGAGTTCCTTGGGCTCGATAAAATTGCYAGTACMTTCCCCACARCAAACAAAAGTAGTGACGTAATTGTGGGAGTCCTTGACACTGGTGTATGGCCTGAAAGTAAGAGCTTTGATGATACCGGATACGGGCCAATCCCCCACAGTTGGAAAGGGAAATGTGAAACAAGTACCAATTTCACGACCTCAAACTGTAATAAAAAATTGATCGGTGCAAGGTTCTATACAAAGGGATTTGAGGCATCGATGGGTTCGATGAATGAAATCAACGAGGCTAGATCGCCTCGAGACGATGATGGCCATGGAACCCACA | 604 | 0.4139 | MSNVSLARTDKSDNEKITYIVHVARSQMPTSFDHHLTWYGSILKSVSMSAEMLYTYNNALNGFSTTLTVEELQSLKSQPGILKVTPDKTYKLLTTRTPEFLGLDKIASTFPTXNKSSDVIVGVLDTGVWPESKSFDDTGYGPIPHSWKGKCETSTNFTTSNCNKKLIGARFYTKGFEASMGSMNEINEARSPRDDDGHGTH | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme1573g00001 | 201 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 2 | 93 | IPR037045 | - | |
| Trme1573g00001 | 201 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 100 | 201 | - | - | |
| Trme1573g00001 | 201 | Gene3D | Peptidase S8/S53 domain | 118 | 201 | IPR036852 | GO:0004252|GO:0006508 | |
| Trme1573g00001 | 201 | SUPERFAMILY | Subtilisin-like | 35 | 201 | IPR036852 | GO:0004252|GO:0006508 | |
| Trme1573g00001 | 201 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 19 | 201 | IPR045051 | - | |
| Trme1573g00001 | 201 | FunFam | Subtilisin-like protease SBT1.9 | 7 | 93 | - | - | |
| Trme1573g00001 | 201 | Pfam | Peptidase inhibitor I9 | 18 | 92 | IPR010259 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme1573g00001 | Trme-Chr1573 | 1 | 604 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme1573g00001 | 4 | 201 | Subtilisin-like Serine Gene Family | AT5G67360 | 60.804 | 3.20e-84 | 262 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme1573g00001 | - | - | vvo:131633560 | 305.449 |