Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme157362g00001 GTAAACTTTTTCTTGCTTCGGCGGCTACTTGGTGTCCGGACAAAAGGATCCGAGAGACAGGGAAAGGTATCTAAGCTGGTCAAAGCAGAAATGCTAATGTTGAACATAGGATCAATGTCAACAGGGGCGAGAGTAATTGCTGTGAGGAACGACTTGGCAAAATTGCAACTTACATCTCCTGTGTGCACTAGCAGAGGTGAGAAGATTGCACTCAGTCGACGTGTCGAGAAGCATTGGCGTCTTATTGGGTGGGGTCAAATCCAAGCTGGAATCACTCTCGAAGTCCCTCCTGCACCCATCTTGAGTTGA 309 0.479 VNFFLLRRLLGVRTKGSERQGKVSKLVKAEMLMLNIGSMSTGARVIAVRNDLAKLQLTSPVCTSRGEKIALSRRVEKHWRLIGWGQIQAGITLEVPPAPILS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme157362g00001 102 Gene3D Translation factors 1 96 - -
Trme157362g00001 102 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 95 - -
Trme157362g00001 102 CDD eIF2_gamma_III 1 87 IPR015256 -
Trme157362g00001 102 Pfam Initiation factor eIF2 gamma, C terminal 1 87 IPR015256 -
Trme157362g00001 102 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1 88 IPR009001 -
Trme157362g00001 102 FunFam Eukaryotic translation initiation factor 2 subunit gamma 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme157362g00001 Trme-Chr157362 102 410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme157362g00001 1 100 Eukaryotic Initiation Factors Gene Family AT1G04170 84.000 2.62e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme157362g00001 K03242 - gmx:100784099 190.274