Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme157225g00001 AAAGACCATAGAAGATGGATTAAGGCTTCAAAGGTTGCTCTCAAGATATTGTTCCCCGCCGAGCGACGACTCTGCAATCTTGTTTTCTTCGGACTCTCCACAGTCGCCGATCTCTCCTTCACGAAGGTTTGTAGGGGATGCACTATTCATTTGCTGAATTTCGGTGATGCAGTAGCAAACGGAAGTCATTCGCCTGAGCAGTTATTTAAAATCCTTGATGTGTTTGAAACATTGCGTGACCTAGTTCCGGAGTTTGAGTCTCTATTTTGTGATCAGTACAGTGTGTCGCTAAGGAATGAAGCAAACACAATTTTGAAGAAATTGGCAAAAGCAATAGTGGAGATTTTCATGGTGTTGGAAAATGTAATTCGCCGAGATCTAGCAAAGGCGGAAGTTCCCGGGGGCGGAATTCATCCCATTATCCGTTACATGATGAACTACTTCTGCCTCACTTGTGACTATCGACAAACACTAGAGCAGGTGTTTGAAGACCATGGACATTTGTTGAGGGAATACCCCAAGCTTG 526 0.4411 KDHRRWIKASKVALKILFPAERRLCNLVFFGLSTVADLSFTKVCRGCTIHLLNFGDAVANGSHSPEQLFKILDVFETLRDLVPEFESLFCDQYSVSLRNEANTILKKLAKAIVEIFMVLENVIRRDLAKAEVPGGGIHPIIRYMMNYFCLTCDYRQTLEQVFEDHGHLLREYPKL 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme157225g00001 175 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 164 IPR004140 GO:0000145|GO:0006887
Trme157225g00001 175 SUPERFAMILY Cullin repeat-like 5 167 IPR016159 -
Trme157225g00001 175 Pfam Exo70 exocyst complex subunit 5 166 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme157225g00001 175 Gene3D Exocyst complex component Exo70 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme157225g00001 Trme-Chr157225 3 528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme157225g00001 5 164 EXO70 exocyst subunit family AT5G58430 70.000 2.99e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme157225g00001 K07195 - psat:127118479 254.603