Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme157188g00001 CTTTCTAGGTCAATTGGAGACATGGATGTTGGGGAATTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAAAGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCTGTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCCGAACTTGCTGCTATGCAGGTTGTCAAGGTAATATATTCTACAATGTTAGTTGTAGACTTGTAG 234 0.4103 LSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDAVSSEMAAKSCRGLPAELAAMQVVKVIYSTMLVVDL 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme157188g00001 77 ProSiteProfiles PPM-type phosphatase domain profile. 1 77 IPR001932 -
Trme157188g00001 77 SUPERFAMILY PP2C-like 1 66 IPR036457 -
Trme157188g00001 77 PANTHER PROTEIN PHOSPHATASE 1 69 IPR015655 GO:0004722|GO:0006470
Trme157188g00001 77 Pfam Protein phosphatase 2C 1 53 IPR001932 -
Trme157188g00001 77 Gene3D - 1 77 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme157188g00001 Trme-Chr157188 1 354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme157188g00001 1 66 PP2C-type Phosphatase Gene Family AT1G68410 86.364 5.02e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme157188g00001 - - tpra:123901213 130.183