Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme157161g00001 CTGGTTATTGATGCTATTGATTTTGATGGTAGGCTTGCTGTGAATAAGAAGGCCGCTCCCGCTACTAAGGGGGGAAGGAAACCAGCCAAGGGAAAGGAACCAAAGGACCCTAACAAGCCAAAGAGACCTGCAAGTGCTTTCTTCATTTTCATGGAGGAGTTTAGGAAGCAGTTTAACAAGGAAAACCCTGACAACAAAGCTGTGTCTGCT 210 0.4619 MVIDAIDFDGRLAVNKKAAPATKGGRKPAKGKEPKDPNKPKRPASAFFIFMEEFRKQFNKENPDNKAVSA 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme157161g00001 70 Gene3D High mobility group box domain 24 70 IPR036910 -
Trme157161g00001 70 MobiDBLite consensus disorder prediction 16 44 - -
Trme157161g00001 70 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 9 70 IPR031061 -
Trme157161g00001 70 SUPERFAMILY HMG-box 27 66 IPR036910 -
Trme157161g00001 70 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 40 70 IPR009071 -
Trme157161g00001 70 MobiDBLite consensus disorder prediction 26 40 - -
Trme157161g00001 70 Pfam HMG (high mobility group) box 40 66 IPR009071 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Trme157161g00001 HMG_box 7.7e-08 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme157161g00001 K25507 - qsa:O6P43_018776 113.62