Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme157062g00001 ATGGTGAGGGTTAGTGTCTTGAATGATGCTCTCAGGAGCATTTACAATGCTGATAAACTTGGGAAGCGTCAAGTTATGATTAGGCCATCATCAAAAGTCATTATCAAATTCCTCATGGTCATGCAAAAGCATGGATATATTGGGGAGTTTGAATACGTCGATGATCACAGGGCTGGAAAAATTGTGGTTCAATTGAATG 199 0.397 MVRVSVLNDALRSIYNADKLGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFEYVDDHRAGKIVVQLN 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme157062g00001 66 SUPERFAMILY Ribosomal protein S8 4 65 IPR035987 GO:0003735|GO:0005840|GO:0006412
Trme157062g00001 66 Pfam Ribosomal protein S8 7 65 IPR000630 GO:0003735|GO:0005840|GO:0006412
Trme157062g00001 66 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 66 IPR000630 GO:0003735|GO:0005840|GO:0006412
Trme157062g00001 66 Gene3D - 1 66 - -
Trme157062g00001 66 FunFam 40S ribosomal protein S15a 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme157062g00001 Trme-Chr157062 17 215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme157062g00001 1 66 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 87.879 5.60e-39 123