Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15677g00001 ATGTCCGTTGTTATTCGGTTTCCTGACAATGTTGTAAAGGTGCTAGTCAAAGGAGCTGATACATCAATGTTTAGCATTTTGGCAAACGGCAGTGAGAGCCACAATAGCTTATTGCATGCAACGCAGAGCCATTTGACTGAATATTCTTCGCAAGGTTTGCGCACCCTTGTAGTNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTGGCAAAGCAGGTATGGAGAGGCAAGCACTGCCTTAACTGACAGAGCTAGTAAACTACGTCAAGCGGCAGCTCTTATAGAATGCAATTTAAATCTACTTGGAGCAACCGGAATCGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAACAAGAGACTGCGATTTCAATTGGTCTTTCCTGCAAGCTTCTCAGTGCAGATATGCAGCAAATTGTTATAAATGGCACTTCAGAGGAAGAATGCAGAAATCTTTTGGGTGATGCAATAGCTAAATATGGTGTGAGATCTTCAAGTAGAGGGCATCAGAATCTGAAGAATAAAACAAATGCTGAACATGGTGATCTTGATATTTCCAATGGTTCAAAGTCAATGAGTTTGCCCAAGTGGAATCCAGGAAAGGAAGAAGGAACTAATACTCCATTGGCACTCATAATTGACGGGAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAG 744 0.4073 MSVVIRFPDNVVKVLVKGADTSMFSILANGSESHNSLLHATQSHLTEYSSQGLRTLVVXXXXXXXXXXXXWQSRYGEASTALTDRASKLRQAAALIECNLNLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIVINGTSEEECRNLLGDAIAKYGVRSSSRGHQNLKNKTNAEHGDLDISNGSKSMSLPKWNPGKEEGTNTPLALIIDGNSLVYILEKELESE 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15677g00001 248 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 245 - -
Trme15677g00001 248 MobiDBLite consensus disorder prediction 186 221 - -
Trme15677g00001 248 NCBIfam HAD-IC family P-type ATPase 100 151 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trme15677g00001 248 SUPERFAMILY HAD-like 94 162 IPR036412 -
Trme15677g00001 248 Gene3D - 1 74 IPR023299 GO:0000166
Trme15677g00001 248 Gene3D - 100 247 IPR023214 -
Trme15677g00001 248 Pfam haloacid dehalogenase-like hydrolase 80 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15677g00001 Trme-Chr15677 25 768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15677g00001 1 246 Primary Pumps ATPases AT5G04930 46.748 1.86e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15677g00001 K14802 - gmx:100789830 386.726