Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme156318g00001 ATGGGATTCAAAGACAGTAATGACTCCATGGTGGCAATTCAGTTGACTGTTGATTTGAAGCCTGTTTTTCCAAGAGAAGCCGAAAGAATGGAGCAGTGCAAGGGTAGGGCTTTTGCTTTACAAGATGAGCCGGAAGTTTCTACGATACGGTTGCCTTTTGACGATGCACCGGGATTGGAAATGGCTACAACATTTGGAGGTTTCTGCTTGAGGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGTCTGCTTACAGACATAGATCAATTCATTGTTCTTGTCTCAAATGGGTTAAAAATTTCAATCTTGTATCTATTTCATTAG 330 0.4091 MGFKDSNDSMVAIQLTVDLKPVFPREAERMEQCKGRAFALQDEPEVSTIRLPFDDAPGLEMATTFGGFCLREYGVISIPEFSHRLLTDIDQFIVLVSNGLKISILYLFH 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme156318g00001 109 Gene3D - 1 102 IPR036457 -
Trme156318g00001 109 Pfam Protein phosphatase 2C 12 100 IPR001932 -
Trme156318g00001 109 ProSiteProfiles PPM-type phosphatase domain profile. 1 109 IPR001932 -
Trme156318g00001 109 PANTHER PROTEIN PHOSPHATASE 12 100 IPR015655 GO:0004722|GO:0006470
Trme156318g00001 109 SUPERFAMILY PP2C-like 11 100 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme156318g00001 Trme-Chr156318 26 452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme156318g00001 1 100 PP2C-type Phosphatase Gene Family AT1G03590 76.000 1.33e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme156318g00001 - - cit:102615376 163.31