Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme156034g00001 ATCACAGGAACCTATGCAGGGCAGTACATCATGCAGGGTTTCTTGGACATAAGGATGAAAAGATGGAAAAGAAACTTGATGACTAGGTGCATTGCCATAGCACCTAGTCTTGTTGTTGCCATAGTTGGTGGTTCTTCTGGTTCTAGTCGGCTTATCATCATCGCATCGATGATACTTTCTTTTGAGCTTCCTTTCGCTCTAATTCCACTCCTTAAGTTTAGCAGCAGCAGTACCAAAATGGGACCTCACAAGAATTCAATGATTGTGAGTTATCCTTTTCCATCCTCTATATGTATGCTAAGATAA 306 0.4118 ITGTYAGQYIMQGFLDIRMKRWKRNLMTRCIAIAPSLVVAIVGGSSGSSRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIVSYPFPSSICMLR 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme156034g00001 101 PRINTS Natural resistance-associated macrophage protein signature 24 41 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme156034g00001 101 PRINTS Natural resistance-associated macrophage protein signature 56 75 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme156034g00001 101 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 90 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme156034g00001 101 Pfam Natural resistance-associated macrophage protein 1 86 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme156034g00001 Trme-Chr156034 2 513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme156034g00001 1 90 Inorganic Solute Cotransporters AT1G15960 72.222 4.34e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme156034g00001 K21398 - lja:Lj4g3v1500410.1 152.91