Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme155g00002 ATGCATGACTTGATACAAGAAATGGGAAAACAAGTTGTTCGTGAAGAATCTCCTAAGAATCCTGGACAACGCAGTAGATTATGTGATCCTAAAGAAGTTTACGATGTATTGAAAAATAATAGAGGTGCTGATATGGTTGAAGTCATATCTTTGGATGCTAATGAACATATAAATATAAATTTAAGCCCCAAAGCATTTGAAAAGATGAAAAACCTAAGAAAATTTGAAATATTTTATGTGGAATGGGTATCCATTGAAGTCTCTGCCTCCTTGTCCGTCAACGCTTGTGGAGCTTTCCCTGGAAGACAGCAATGTAGAGAAACTTTGGAATGGAGTACTGGTATGCACTGTCCATGTANGCCTCCTTGTCCGTCAACGCTTGTGGAGCTTTCCCTTGAAGACAGCAATGTAGAGAAACTTTGGAATGGAGTACTGAATTTGCCAAATTTAGAGACACTTAATCTCGCTGGAAGCAAAAAGTTGATAGAGTGTCCAAATGTGTCTGGTTCCCCGAATCTAAATTTTGTGTTTCTTAATGATTGTGAAAGCATGTCTGAAGTTGATCCATCAATTTTCCATCTCCAAAAGCTTCATAGTTTAGTCATGTCTGGATGTACGTCCCTTAAAAGTCTTTCCAGTAACACTTGTTCTCCAGCCATCCGTATACTGTATGCATCGGGTTGCATCAATCTCCAAGAGTTCTCGGTCACATTTACTTCTGCTGATGATTTAGATTTGTTTATATCAAACTGGAATGGGAATGAACTTCCACCATCACTATTGCAGACAAAAAATCTTGATACCTTTTCCTTTCCTATAGTTGAATGTCTTGTGGATCTTCCTGAAAATTTTGCAAAATGTATTTGGCTTGTGAATGCAGTAAATCATGAACAAGACCCTTCCATCACCTTACATAAAGTACTTTCTGGTCCTGCCTTCATCACTGTAAAAATCTTGATCCTTTATATAATCCCTACCTTGTATCAAATCCCAGAAAATATCTCCTTACTATCGTCATTACAGTCTTTAACACTATTTGGTCTTGGCATTCATAGCTTGCCTGATTCCATTATATGTCTTCCCCAACTCCGTGAACTTCATATTTACTATTGTTATATGCTTCTATTTATTCCGCCACTTTCATTTTTCATTCCATTGGTCTATGTCTCGGATTGTCAATCTCTTGGGACAGTGTTGTATTCAATGGAGAAACCATACAAATCCAAACCTTTCACTGTTGTTCTCCTTAACTGCAAAAATTTGGATCCTTTTTCGTGGCGTAGAGTTATGAATGAGGCTATGGTTGAGATTGAACTTAGAGCAAGTCTATGTTCAGCAAATGAAATAGATGATGATATCATTCAGTACATGTTACCTGCTATGCCATGCATAGACCATTACTTCCATTACACTTCTACACGAGTCTCTTTCACTATTTCACTTCCTCCTAATTTGTAG 1458 0.3745 MHDLIQEMGKQVVREESPKNPGQRSRLCDPKEVYDVLKNNRGADMVEVISLDANEHININLSPKAFEKMKNLRKFEIFYVEWVSIEVSASLSVNACGAFPGRQQCRETLEWSTGMHCPCXPPCPSTLVELSLEDSNVEKLWNGVLNLPNLETLNLAGSKKLIECPNVSGSPNLNFVFLNDCESMSEVDPSIFHLQKLHSLVMSGCTSLKSLSSNTCSPAIRILYASGCINLQEFSVTFTSADDLDLFISNWNGNELPPSLLQTKNLDTFSFPIVECLVDLPENFAKCIWLVNAVNHEQDPSITLHKVLSGPAFITVKILILYIIPTLYQIPENISLLSSLQSLTLFGLGIHSLPDSIICLPQLRELHIYYCYMLLFIPPLSFFIPLVYVSDCQSLGTVLYSMEKPYKSKPFTVVLLNCKNLDPFSWRRVMNEAMVEIELRASLCSANEIDDDIIQYMLPAMPCIDHYFHYTSTRVSFTISLPPNL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme155g00002 485 Gene3D Ribonuclease Inhibitor 42 242 IPR032675 -
Trme155g00002 485 Gene3D Ribonuclease Inhibitor 243 430 IPR032675 -
Trme155g00002 485 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 391 IPR044974 GO:0006952
Trme155g00002 485 SUPERFAMILY L domain-like 1 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme155g00002 Trme-Chr155 1066 2800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme155g00002 1 366 WRKY Transcription Factor Family AT4G12020 26.753 3.88e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme155g00002 - - psat:127076381 452.595