Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1557g00001 ATGGCATTGTTGAGTGCCGAAGATGCTGGTAGTTTCAACAACAGTGTTGCTGGACAGCAGGCTGTTTTAGAAACTGTTGCTAGAGTTAAGCCCAAGAAAAATGAGAGCAAAGAGGAAAAGTCATTTCAGTTCCACGATGTTTTCAATTTGGACAGTGAGAACCGGGTTGAGGATACACCAACTTTAATTGATCGAAAGGACAATGTATTTATCATATCCAATCCCAAGTCAAAGTATCCTGTTCTGCAATTAGACTTGAGGTTTACTTACAATTCCTTCCCTTGTTCCTTTTTCTTTTTCAAGCGGCATTTCGTATTGATATCAGATCTTGTGGTTGTCATTGTCTCTGCAACCTGTGGTGGCATTGCTTTTGCTTGTGCTGGACAACCGGTTATGACTGGATATCTGTTAGCAGGATCCCTCATTGGACCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTCGAGACAGTTGCTCAATTCGGCGTCATCTTTTTGCTCTTTGCACTGGGCTTAGAGTTTTCCACAACAAAGCTTCGAGTTGTTCGAGCAGTGGCTATTCTTGGAGGTCTGCTGCAAATTCTCTTATTTATGTGCTTGTGTGGAATAATAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTCTATCCATGTCTTCAACTGCAGTG 690 0.4159 MALLSAEDAGSFNNSVAGQQAVLETVARVKPKKNESKEEKSFQFHDVFNLDSENRVEDTPTLIDRKDNVFIISNPKSKYPVLQLDLRFTYNSFPCSFFFFKRHFVLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQILLFMCLCGIIASLCGGKSSEGIFVGAFLSMSSTAV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1557g00001 230 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 7 88 IPR045158 GO:0015386|GO:0071805|GO:1902600
Trme1557g00001 230 Gene3D - 104 230 IPR038770 -
Trme1557g00001 230 Pfam Sodium/hydrogen exchanger family 111 230 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1557g00001 Trme-Chr1557 235 2928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1557g00001 8 230 Antiporters AT5G11800 80.804 1.14e-121 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1557g00001 K26735 - gmx:100788884 353.984