Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15571g00001 GTGACACAATTTGGTTGTGGGGGTTTTGTGATAGGTCTAGTGTTCAGCCATAGTATATGTGATGGCCTTGGTGCTGCACAATTTCTAAATGCAGTTGGGGAGCTAGCTAGAGGACTTGACAAACCCACCATCGAACCAGTGTGGAATAGGAACTTTTTTCCCTCTCCTCAAGCACCTTCACTGCCAAAAATATCTCTTGCTTGTCCACCTCAAATGCCACACTACAATCTAGAGCATTCTAATATAGACATGCCTATGGATCAAATCAACCGGCTGAAGAGACAGTTCCAGCAAGTAACTGGWCAAASTTGTTCTACCTTCGAAATTGTTGCTGCATTGTTTTGGAGCAGCAGAACAAGAGCCATAAATTTCGATCCCAATACCCAAGTGAAGCTTGTGTTCTTTGCAAATTGTCGACACCTCATAAACCCTCCTCTACCCAAGGGTTTCTACGGAAACTGTTTCTTCCCAGTGACAACTACAGCTTCATGCGAGTCACTTAGAAAAGCACCAAATATCTTTGAAGTGGTGAAGCTGATCCAAGAAGCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNGTGGGGTCCACCTGTCCATGTGGTCCCCATTCAAGGGTCTAGCATTGTACCAGCTGGCATTATGCGCTCACTGCCTCTCCCGAACAGAGGGATTCGTTTGGTTACATGGTGCGTGGAGGAGGCACATCGCCTTCCCTTCATTGATCAAATACATGGTCTTATAAAGCAGCAACTGTTATGA 888 0.3727 VTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGELARGLDKPTIEPVWNRNFFPSPQAPSLPKISLACPPQMPHYNLEHSNIDMPMDQINRLKRQFQQVTGQXCSTFEIVAALFWSSRTRAINFDPNTQVKLVFFANCRHLINPPLPKGFYGNCFFPVTTTASCESLRKAPNIFEVVKLIQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGPPVHVVPIQGSSIVPAGIMRSLPLPNRGIRLVTWCVEEAHRLPFIDQIHGLIKQQLL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15571g00001 295 PANTHER ACYL TRANSFERASE 4 237 287 - -
Trme15571g00001 295 Pfam Transferase family 1 184 - -
Trme15571g00001 295 Gene3D - 67 188 IPR023213 -
Trme15571g00001 295 Coils Coil 176 183 - -
Trme15571g00001 295 Gene3D - 1 66 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15571g00001 Trme-Chr15571 100 987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15571g00001 1 174 Monolignol Biosynthesis Gene Families AT5G48930 29.787 1.24e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15571g00001 - - mtr:11426631 402.905