Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme155660g00001 TTTGGCTTGGCAAAAATTTGTGGGGATGATCAAGTTGAAGGGAATACAAACAAAGTAGTTGGAACACATGGTTATATGGCTCCTGAGTATGCTATTGACGGACTATTCTCCATAAAATCAGATGTATTTAGCTTTGGAATACTATTGCTAGAGATTGTGAGTGGAAGGAAAAATAAAGGACTTAGCTATCCAAGAAACGATTACAATCTTGTTGGACATGTGAGTAACACTTTCATCTTTCTCTTTCCTTAA 252 0.3611 FGLAKICGDDQVEGNTNKVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGRKNKGLSYPRNDYNLVGHVSNTFIFLFP 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme155660g00001 83 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 75 - -
Trme155660g00001 83 Gene3D Transferase(Phosphotransferase) domain 1 1 78 - -
Trme155660g00001 83 ProSiteProfiles Protein kinase domain profile. 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme155660g00001 83 SUPERFAMILY Protein kinase-like (PK-like) 1 58 IPR011009 -
Trme155660g00001 83 Pfam Protein tyrosine and serine/threonine kinase 1 57 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme155660g00001 Trme-Chr155660 137 466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme155660g00001 1 73 Receptor kinase-like Gene Family AT4G23230 58.904 5.34e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme155660g00001 PK_Tyr_Ser-Thr 4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme155660g00001 - - tpra:123915417 140.969