Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme155507g00001 ATGCCTAGGCAACCAATGGCAAACCAGTTCAACACCATCACAGCTCAGGGTAAAAAAGATCCTAATCAAAACACTGGAATTGTGATCCAGAAATCAACTATCACTACACTACCTAATGACAATCTCATAGCACCTACTTACCTTGGTAGACCATGGAAAGATTTCTCCACTACTATTATCATGAAATCWRAKATTGGATCATTCTTGAAACCAGTAGGGTGGATAAGTTGGGTTTTTAATGTGGATCCTCCAAGTAGCATCCTCTATGCTGAATACCAGAACACTGGGCCAGGAGCAGCAGTAGCCCAGAGAGTCAAATGGGCCGGTTATAAGCCCGCTCTCGAAGACGGAGAAGCTCTGAAGTTCACTGTGGATTCCTTTATCCAGGGCCCAGAGTGGTTGCCAAATGCTGCTGTGCAGTTTGATTCTACCCTGTAA 438 0.4429 MPRQPMANQFNTITAQGKKDPNQNTGIVIQKSTITTLPNDNLIAPTYLGRPWKDFSTTIIMKSXIGSFLKPVGWISWVFNVDPPSSILYAEYQNTGPGAAVAQRVKWAGYKPALEDGEALKFTVDSFIQGPEWLPNAAVQFDSTL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme155507g00001 145 PANTHER PECTINESTERASE 2 135 - -
Trme155507g00001 145 Pfam Pectinesterase 2 130 IPR000070 GO:0030599|GO:0042545
Trme155507g00001 145 SUPERFAMILY Pectin lyase-like 3 143 IPR011050 -
Trme155507g00001 145 Gene3D - 2 145 IPR012334 -
Trme155507g00001 145 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme155507g00001 Trme-Chr155507 74 511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme155507g00001 1 139 Carbohydrate Esterase AT1G53840 64.029 1.39e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme155507g00001 - - lang:109360530 249.21