Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme155376g00001 ATAATCAATGAACCAACAGCTGCTGCTCTGGCATATGGCCTTGACAAGAGAATTACTAACTGTGATGGAGAACGAAATATTTTCATCTTCGACCTTGGTGGGGGGACTTTTGATGTGTCTCTCCTTACAATTAAGGATGAGGTCTTTCAAGTTAAGGCCACTGCTGGAAACACTCACCTCGGAGGAGAGGACTTTGATAATAGAATGGTGAACTACTTGGCACAAGAGTTTAAAAACAAGAAAAAGGTGGACATTACTGGAAACCCAAGAGCCTTAAGGAGGTTGAGAACGGCATGCGAGAGAGCGAAAAAGACTCTATCTTTTTCTTCTTTCACCACCATTGAGGTTGACTCTTTATTTCAAGGCATTGACTTCTTTACATCAATTACCCGTGCTAAGTTTGAGGAAATCAATATGGATCTTTTCAACGGGTGTTTGAAAACTGTTGAGAGTTGTCTTGCTGATGCCAAGATGGACAAAAGTTCTATCCATGATGTTGTCCTTGTTGGTGGCTCGTCTAGAATTCCAAAAGT 533 0.4128 IINEPTAAALAYGLDKRITNCDGERNIFIFDLGGGTFDVSLLTIKDEVFQVKATAGNTHLGGEDFDNRMVNYLAQEFKNKKKVDITGNPRALRRLRTACERAKKTLSFSSFTTIEVDSLFQGIDFFTSITRAKFEEINMDLFNGCLKTVESCLADAKMDKSSIHDVVLVGGSSRIPKV 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme155376g00001 178 ProSitePatterns Heat shock hsp70 proteins family signature 2. 29 42 IPR018181 -
Trme155376g00001 178 Gene3D Actin; Chain A, domain 4 66 143 - -
Trme155376g00001 178 SUPERFAMILY Actin-like ATPase domain 24 178 IPR043129 -
Trme155376g00001 178 PANTHER HEAT SHOCK PROTEIN 70KDA 1 178 IPR013126 GO:0005524|GO:0140662
Trme155376g00001 178 Gene3D - 21 178 - -
Trme155376g00001 178 PRINTS 70kDa heat shock protein signature 163 178 - -
Trme155376g00001 178 PRINTS 70kDa heat shock protein signature 35 45 - -
Trme155376g00001 178 FunFam Heat shock 70 kDa 61 144 - -
Trme155376g00001 178 Pfam Hsp70 protein 1 178 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme155376g00001 Trme-Chr155376 1 533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme155376g00001 1 178 Calmodulin-binding Proteins AT5G02500 74.719 2.05e-97 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme155376g00001 K03283 - gmx:100804476 297.36