Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme155304g00001 GCAATGCAGGTTTCTCAGAAGCCGCATACACCATCTGCAGAAGTTAACANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNCCAAGCCTAGAATGCGTTGGAGTCCAGAACTTCATGAGGCCTTTGTGGAAGCAGTTAACCAGCTTGGTGGTAGTGACAGTATGTTTACTTCTTCCTAA 186 0.3656 AMQVSQKPHTPSAEVNXXXXXXXXXXXXXXKPRMRWSPELHEAFVEAVNQLGGSDSMFTSS 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme155304g00001 61 MobiDBLite consensus disorder prediction 1 29 - -
Trme155304g00001 61 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 29 55 IPR044848 GO:0003700
Trme155304g00001 61 SUPERFAMILY Homeodomain-like 29 55 IPR009057 -
Trme155304g00001 61 Gene3D - 30 60 - -
Trme155304g00001 61 NCBIfam myb-like DNA-binding domain, SHAQKYF class 31 56 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme155304g00001 Trme-Chr155304 236 421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme155304g00001 31 55 G2-like Transcription Factor Family AT3G04450 84.000 1.76e-10 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trme155304g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme155304g00001 - - mtr:25499705 67.781