Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15489g00001 GCTGACACAAATGGAAATGGAAATGGGACGGAGGAGTCTTTGCCTCCGCCACCTCCAGTTGTCCCCTCAGATGTGGTACCTCTCAAAGCAGAGGAGGTGATCCCAGCCCCTCCTGAACCTGTGAAGAAAAAAATTACCCGACTTCCAATAGCCAGACGTGGTCTGGGATCAAAAGGAAATAAGATACCTCTTTTAACTAATCACTTCAATGTTAATATTGGTAACAATGATGGATTTTTTTTCCAGTACAGTGTGTCTTTTGCTTATGAAGATGGAAGCCCTGTGGAAGCTAAGGGTGTCGGAAGGAAGATAATGGATAGGGTGCAGGAGACATATGCTTCTGACTTGAATGGCAAGGAATTTGCTTATGACGGGGAGAAAAGTCTGTTTACTATCGGCTCTCTTCCTCAAAACAAACTTGAGTTTGAAATTGTTTTAGAGGATGTTATATCCAACAGAAATAATGGCAATCGTAGTCCTGATGCTAATGGGGACAATGAGAGTGACAAAAAGAGGGTGCGACGCCCGTACAATGCAAAGACATTTAAAGTTGAGATTAGCTTTGCTACTAAAGTTCCTATGTATGCCATTGCCAATGCATTACGCGGGCAGGAAACAGAGAATTTCCAAGAAGCTGTAAGAGTTCTTGATATCATATTGAGGCAACATGCTGCCAAGCAGGGCTGCCTACTTGTGCGCCAGAATTTCTTCCACAATGATCCCAAGAATTTTGCTGATGTGGGGGGTGGTGTTCTAGGCTGTAGAGGATTCCATTCAAGTTTTAGAGCTACACAAAGCGGGCTATCTCTTAACATAGATGTCTCAACTACTATGATAATTCAACCTGGCCCTGTGGTGGATTTCTTAATTTCCAATCAAAATGTGAGAGATCCTTTTAGTCTTGACTGGACAAAGGTATACCAATTTGCTTAA 933 0.4266 ADTNGNGNGTEESLPPPPPVVPSDVVPLKAEEVIPAPPEPVKKKITRLPIARRGLGSKGNKIPLLTNHFNVNIGNNDGFFFQYSVSFAYEDGSPVEAKGVGRKIMDRVQETYASDLNGKEFAYDGEKSLFTIGSLPQNKLEFEIVLEDVISNRNNGNRSPDANGDNESDKKRVRRPYNAKTFKVEISFATKVPMYAIANALRGQETENFQEAVRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFADVGGGVLGCRGFHSSFRATQSGLSLNIDVSTTMIIQPGPVVDFLISNQNVRDPFSLDWTKVYQFA 310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme15489g00001 310 Pfam N-terminal domain of argonaute 61 220 IPR032474 -
Trme15489g00001 310 Pfam Argonaute linker 1 domain 232 280 IPR014811 -
Trme15489g00001 310 MobiDBLite consensus disorder prediction 1 22 - -
Trme15489g00001 310 SUPERFAMILY PAZ domain 62 302 IPR036085 GO:0005515
Trme15489g00001 310 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 41 297 - -
Trme15489g00001 310 SMART DUF1785_2 230 282 IPR014811 -
Trme15489g00001 310 MobiDBLite consensus disorder prediction 153 174 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme15489g00001 Trme-Chr15489 2 1330 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15489g00001 52 289 Eukaryotic Initiation Factors Gene Family AT5G43810 33.891 1.34e-30 120