Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme154841g00001 TCTAGGATTCCCAAAGTGCAGGAACTATTGAGTAACTTCTTTAATGGTAAGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTGTTGAGTGAAGGCATTAAGAATGTTCCAAACTTGGTGCTGCGAGATGTGACCCCTTTATCACTTGGTATATTTGTGATTGGAGATATCATGAGTGTGGTCATTCCTAGGAATACTTCTGTACCTGTCAAGAAGACACAAGGTTATTCTACAGCAATTGATAACCAAACCGCAACCCTAATTCAGGTTTATGAGGGTGAAAGAGCAAGAGCTACTGACAACAATCTTCTTGGTTTTTTTAATCTTTCTTGGATTCAAGGTGTTCCTCGTGGCCATCCCTTGGAGGTATGCTTCGCTATTGACGAAAATGGCATCCTAACTGTTTCTGCTAAGGAAATATCCACTGGCAATACAAATGAAATCACGATAACCAATGACAAAGAAAG 500 0.416 SRIPKVQELLSNFFNGKDLCKSINPDEAVAYGAAVQAALLSEGIKNVPNLVLRDVTPLSLGIFVIGDIMSVVIPRNTSVPVKKTQGYSTAIDNQTATLIQVYEGERARATDNNLLGFFNLSWIQGVPRGHPLEVCFAIDENGILTVSAKEISTGNTNEITITNDKE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme154841g00001 166 PANTHER HEAT SHOCK PROTEIN 70KDA 1 165 IPR013126 GO:0005524|GO:0140662
Trme154841g00001 166 Gene3D - 1 20 - -
Trme154841g00001 166 Pfam Hsp70 protein 1 165 IPR013126 GO:0005524|GO:0140662
Trme154841g00001 166 Gene3D - 21 38 - -
Trme154841g00001 166 SUPERFAMILY Actin-like ATPase domain 1 41 IPR043129 -
Trme154841g00001 166 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 39 166 IPR029047 -
Trme154841g00001 166 PRINTS 70kDa heat shock protein signature 49 68 - -
Trme154841g00001 166 PRINTS 70kDa heat shock protein signature 129 145 - -
Trme154841g00001 166 PRINTS 70kDa heat shock protein signature 23 43 - -
Trme154841g00001 166 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 46 165 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme154841g00001 Trme-Chr154841 35 534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme154841g00001 1 165 Calmodulin-binding Proteins AT3G12580 67.066 6.86e-69 218