Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15473g00001 ATGAAGATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGCCAGGAACGTCTAATTGTATATGACTATATGCCGAATTTGAGCCTACTCTCTCATCTTCACGGACAGCACTCAACAGAAAGCCTCCTTGATTGGAATCGACGGATGAATATTGCAATCGGGTCTGCTGAGGGAATTTTGTATCTTCATGTCCAAGCAACACCGCATATCATCCATAGGGATGTTAAAGCAAGCAATGTGTTACTGGATTCAGATTTCCAAGCACGTGTTGCTGATTTTGGTTTTGCCAAGTTGATC 387 0.4186 MKIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSTESLLDWNRRMNIAIGSAEGILYLHVQATPHIIHRDVKASNVLLDSDFQARVADFGFAKLI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15473g00001 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme15473g00001 129 FunFam Protein kinase superfamily protein 54 128 - -
Trme15473g00001 129 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Trme15473g00001 129 SUPERFAMILY Protein kinase-like (PK-like) 2 128 IPR011009 -
Trme15473g00001 129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Trme15473g00001 129 SMART tyrkin_6 1 129 IPR020635 GO:0004713|GO:0006468
Trme15473g00001 129 PANTHER OS01G0253100 PROTEIN 3 128 - -
Trme15473g00001 129 Pfam Protein tyrosine and serine/threonine kinase 1 128 IPR001245 GO:0004672|GO:0006468
Trme15473g00001 129 Gene3D Transferase(Phosphotransferase) domain 1 55 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15473g00001 Trme-Chr15473 864 1490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15473g00001 3 128 Trihelix Transcription Factor Family AT1G70460 55.556 3.24e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Trme15473g00001 PK_Tyr_Ser-Thr 3.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15473g00001 - - lja:Lj3g3v0044340.1 241.506