Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme154721g00001 ATGACCAAAGATTATATTGACTCTCCACGAGATTCAGAAGGCCATGGGACCCATGCAGCATCAATTGCTACAGGGAACCCGGTTAAAATGGCAAGCATGTTAGGCTTTGCACAAGGGACGATAAGAGGAGGAGTCCCATCGGCACGCATCGCTGTCTACAAAGTGTGTTGGGCTACATGCTTTGATGCAAATATTCTTCACGCATTCGATGACGCAATTGCAGACGGGGTTGATTTATTATCAGTCTCAATTGGAGGAGATTCAATTGAAAATATCCATCTTACAGATGGAATTTCTGTTGGAGCATTCCATGCTGTACGACATGGAGTGCTGACAGTAGTGGCAGCGGGGAACTCAGGCCCACGCCCTTCAT 373 0.4692 MTKDYIDSPRDSEGHGTHAASIATGNPVKMASMLGFAQGTIRGGVPSARIAVYKVCWATCFDANILHAFDDAIADGVDLLSVSIGGDSIENIHLTDGISVGAFHAVRHGVLTVVAAGNSGPRPS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme154721g00001 124 MobiDBLite consensus disorder prediction 1 20 - -
Trme154721g00001 124 ProSiteProfiles Serine proteases, subtilase domain profile. 1 124 - -
Trme154721g00001 124 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 124 IPR045051 -
Trme154721g00001 124 Pfam Subtilase family 5 120 IPR000209 GO:0006508|GO:0008236
Trme154721g00001 124 SUPERFAMILY Subtilisin-like 5 123 IPR036852 GO:0004252|GO:0006508
Trme154721g00001 124 Gene3D Peptidase S8/S53 domain 5 123 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme154721g00001 Trme-Chr154721 1 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme154721g00001 5 121 Subtilisin-like Serine Gene Family AT5G59190 58.974 4.61e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme154721g00001 - - mtr:25496696 181.8