Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme154695g00001 ATGGTGGTAAGGGACGGTGAGATGAATTGGCAACAAGGGGAGGTAGATTCGTTGCAGAGGGAAGAAGAAGCGATCAAGAACGACGTCAACAATGGCATCCCATCATCACTTGGAAGACAATCATCCTCGATATACTCACTCACTCTCGANNNNNNNNNNANNNNNNNNNNANNNNNNNNCAAGAATTTCGGGTCGATGAACATGGATGAGTTCCTCAGTAGTATCTGGAATGCAGAAGAAAATCAACAAGCTGCTTCCAACAATAATAACAACAACAGCAGCAACAACAATAATTTGTCTGTAATTCAGAAAGATAACACACAGGCGAGACTTCCTCGACAAAATTCGCTGTCGATTCCAGCACCTCTTTGTAGGAAAACCGTTGAACAAGTTTGGTCTGAGATACACAAAGAACAACA 419 0.3986 MVVRDGEMNWQQGEVDSLQREEEAIKNDVNNGIPSSLGRQSSSIYSLTLXXXXXXXXXXXKNFGSMNMDEFLSSIWNAEENQQAASNNNNNNSSNNNNLSVIQKDNTQARLPRQNSLSIPAPLCRKTVEQVWSEIHKEQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme154695g00001 139 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 139 IPR043452 GO:0003700|GO:0045893
Trme154695g00001 139 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme154695g00001 Trme-Chr154695 116 534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme154695g00001 35 137 bZIP Transcription Factor Family AT2G36270 42.647 1.40e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme154695g00001 K14432 - gmx:100790948 118.242