Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15468g00001 ATGCATGATTTGCTACGAGACATGGGAAGAGCAATTGTCAGCGAACATTTAGCAAAAGAGCCTGCAAAGCATAGTCGATTGTGGTTTCATGAGGATGTGCTGGATGTTTTGTCTAAAAAAACTGGAACAGAAACGGTTGAGGGATTGATTTTGAAGTTGCAAACAACAGACATAATTAGATTCAGTACTAATGCTTTCCAGGAGATGAAAAAGCCGAGGCTTTTAAAACTTGATGGTGTTCACCTCATCGGCGATTATGGGTTAATTTCGAAACAACTGAGATGGGTTGATTGGCAACGATCTACCTTCAAATTTATACCGAATGATTTTGATCAGGGAAATCTAGTTGTTTTTGAATTAAAACATAGCAATGTTAAACAAGTTTGGCACGAGACCAAGTTGTTGGAGAAACTAAAAGTTCTCAATCTAAGTCATTCCAAGTACTTGAAAAGCACCCCTGACTTTTCAAAATTACCAAATCTAGAAAAGCTCATTTTGAAGGATTGTCCAAGTTTGTCTGAG 522 0.3755 MHDLLRDMGRAIVSEHLAKEPAKHSRLWFHEDVLDVLSKKTGTETVEGLILKLQTTDIIRFSTNAFQEMKKPRLLKLDGVHLIGDYGLISKQLRWVDWQRSTFKFIPNDFDQGNLVVFELKHSNVKQVWHETKLLEKLKVLNLSHSKYLKSTPDFSKLPNLEKLILKDCPSLSE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15468g00001 174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 172 IPR044974 GO:0006952
Trme15468g00001 174 SUPERFAMILY L domain-like 50 173 - -
Trme15468g00001 174 Gene3D Ribonuclease Inhibitor 30 174 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15468g00001 Trme-Chr15468 464 1465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15468g00001 1 169 WRKY Transcription Factor Family AT4G12020 31.016 1.20e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15468g00001 - - vvo:131619861 298.901