Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15448g00001 ATGTCCTCTAGATTAAGTCTTTTAAATGATCGAAGGCTCAAACAGACAAAAGCCCTCCTTGTTCTTGATGATGTGAACAATTCAGCTCAGCTTAAAGATTTAATTGGAATGCGTAGTAACTTTGCACCAAGTAGTAGAATCATTGTGACTAGTAGAGACATGCAGGTACTGAAGAATGTCGATGCTGATGAAATATATGAAGTCAAGGAGATGAATTTTCATGAATCTCTACGACTGTTCTGTTTAAATGCCTTTAAACAAAACAATCCCATAGAAGATTATGCCGGCTTAACAGATAAAATATTAAATTATGCTAAAGGGGTTCCTTTAGCTCTCAAAGTTTTGGGTTTTTTGCTTTGCGGTAGAACAAAGGAAGCATGGGAAAGTCAGTTACAAAAGTTGGATAAGCTTCCTGAGAATGACATTTTCAAAGTGTTGAAATTAAGTTATGAAGGGCTTGATGAAGAGCAGAAGGATATATTTCTGGACATAGCTTGTTTCTATAGAGGACATTTGGAGAATGTTGTGGCACAAACACTGGATAGCTGTGGTTTCTCTGCTCATATTGGAATGGAGGTTCTCAAAGATAGGGCCCTTANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNGCATGA 636 0.3538 MSSRLSLLNDRRLKQTKALLVLDDVNNSAQLKDLIGMRSNFAPSSRIIVTSRDMQVLKNVDADEIYEVKEMNFHESLRLFCLNAFKQNNPIEDYAGLTDKILNYAKGVPLALKVLGFLLCGRTKEAWESQLQKLDKLPENDIFKVLKLSYEGLDEEQKDIFLDIACFYRGHLENVVAQTLDSCGFSAHIGMEVLKDRALXXXXXXXXXXXA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15448g00001 211 Gene3D - 70 154 IPR042197 -
Trme15448g00001 211 Gene3D - 1 66 IPR027417 -
Trme15448g00001 211 PRINTS Disease resistance protein signature 12 26 - -
Trme15448g00001 211 PRINTS Disease resistance protein signature 105 119 - -
Trme15448g00001 211 Pfam NB-ARC domain 12 150 IPR002182 GO:0043531
Trme15448g00001 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 164 IPR027417 -
Trme15448g00001 211 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 199 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15448g00001 Trme-Chr15448 134 769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15448g00001 3 199 WRKY Transcription Factor Family AT5G45050 37.374 1.37e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15448g00001 - - mtr:11410139 314.309