Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme154408g00001 ATGAAGGCAGAGGAGGCTGCACTTTCAGCATTGAAGAGATCATTTGAGGCGTTGAACACTCACCTTGCCCACAATACTTACCTGGTTGGGGAATCTGTTACCCTTGCTGACATCATTACAACAGCCAACTTGTATTTGGGTTTCGCTAAACTCTTGGTCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGGCCAGGTTAAGCAGACTGAAGCTATGCCACCTATTCAATCTGCAAAGAAGCCTGCCCAGCCTAAGGAATCAAAGCCCAAAACCAAAGAAGAACCAAAGAAACTGGCTAAATCAGAGCCCGAAAAGCCCAAAGAAGAAGCTGAAGAGGAGGCACCCAAACCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCAAGCAAGATG 444 0.4302 MKAEEAALSALKRSFEALNTHLAHNTYLVGESVTLADIITTANLYLGFAKLLVKSFTSEFPHVERYFWTXXXXXXXXXXXGQVKQTEAMPPIQSAKKPAQPKESKPKTKEEPKKLAKSEPEKPKEEAEEEAPKPKPKNPLDLLPPSKM 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme154408g00001 148 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 92 IPR010987 -
Trme154408g00001 148 MobiDBLite consensus disorder prediction 79 148 - -
Trme154408g00001 148 Pfam Glutathione S-transferase, C-terminal domain 5 67 IPR004046 -
Trme154408g00001 148 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 136 148 IPR001662 GO:0003746|GO:0006414
Trme154408g00001 148 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 2 148 IPR044628 GO:0004364
Trme154408g00001 148 Gene3D - 1 94 - -
Trme154408g00001 148 MobiDBLite consensus disorder prediction 100 136 - -
Trme154408g00001 148 SUPERFAMILY GST C-terminal domain-like 3 71 IPR036282 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme154408g00001 3 148 Eukaryotic Initiation Factors Gene Family AT1G57720 64.384 2.47e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme154408g00001 K03233 - gmx:547637 155.606