Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15428g00001 ATGCAAAGCATTTCGGCTCCTGCAACCGAAAATGAGGCTACACTTCCATCATCGTCAACACCATCGGATCTTCTCTTTGATGTGCAAAAGATCATTGGTTGCCTCTATCTAATGATTTCAGTTTTAATATTGTCAAGCAGTGTTGTCCTGCAGGCTTTTGCTCTTGGTGATTTTCCTGCACCAATGTCCTTGAGCGCAATGACGTCGTTGTTTGGAGGATTCATGACAGCAGTTGTTCAAGTATTTGAAGGCGAAGAACTTAAAACTGGTTTGCAACTTGTGAGCTTTGGAGACTTGATAGGCTTTTCCATTCTGGCTGGTGGAGTGAGTGGAATATCCCTAAGTTTCAATGGATGGGCCCTTAAGAAGAGAGGACCAGTCTTTGTCTCCATGTTTAGCCCAATTGGAACAGTATGCTCAGTTATTTTCTCTGTATTTAACCTTGGAAACACTATTAATATTGGAAGCATTGTTGGTATGTTCCTTATGTTCAGTGGACTCTATATAGTTCTTTGGGCCAAAGGGAAAGAAGGATATGCAGATGGTGGAATTGTCATCGAGAGTGAGTTTGATGCAGACAAGCCTCTGTTATGTTAA 597 0.4171 MQSISAPATENEATLPSSSTPSDLLFDVQKIIGCLYLMISVLILSSSVVLQAFALGDFPAPMSLSAMTSLFGGFMTAVVQVFEGEELKTGLQLVSFGDLIGFSILAGGVSGISLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVFNLGNTINIGSIVGMFLMFSGLYIVLWAKGKEGYADGGIVIESEFDADKPLLC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15428g00001 198 PANTHER WAT1-RELATED PROTEIN 29 178 IPR030184 GO:0016020|GO:0022857
Trme15428g00001 198 Pfam EamA-like transporter family 32 171 IPR000620 GO:0016020
Trme15428g00001 198 SUPERFAMILY Multidrug resistance efflux transporter EmrE 95 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15428g00001 Trme-Chr15428 10 975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15428g00001 1 181 Nodulin-like Gene Family AT5G47470 52.747 1.10e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15428g00001 - - aprc:113870214 259.225